RegulonDB RegulonDB 10.8: Operon Form

grxD operon and associated TUs in Escherichia coli K-12 genome

Name: grxD
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: grxD
Gene(s): grxD   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISDTU] Automated inference that a single-gene directon is a transcription unit
Name: grxD
+1: 1734162
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 61
Sequence: gcaacaaatagagcaaagggataaaatagcaaaagcgtgatgaaaatgttattttccgatGccgcactgacccgctacaat
                          -35                     -10       +1                   
Evidence: [AIPP]
Reference(s): [1] Huerta AM., et al., 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal NsrR repressor grxD 1734170 1734181 -13.0 aaagcgtgatGAAAATGTTATTttccgatgcc nd [APIORCISFBSCS], [CV(GEA/ROMA)], [GEA] [2]

Regulation by sRNA    
  Small RNA name (Regulator) Regulation type Mechanism Function Binding Sites Evidence Reference
LeftPos RightPos Sequence (RNA-strand)
  ryhB antisense post-transcriptional regulation repressor       [IMP] [3]
Notes: "The provided sequence is that of the RNA strand,i.e. 'U's are showed instead the 'T'"