RegulonDB RegulonDB 11.0: Operon Form

grxD operon and associated TUs in Escherichia coli K-12 genome

Name: grxD
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: grxD
Gene(s): grxD   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
Name: grxD
+1: 1734162
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 61
Sequence: gcaacaaatagagcaaagggataaaatagcaaaagcgtgatgaaaatgttattttccgatGccgcactgacccgctacaat
                          -35                     -10       +1                   
Evidence: [AIPP]
Reference(s): [1] Huerta AM., et al., 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal NsrR repressor grxD 1734170 1734181 -13.0 aaagcgtgatGAAAATGTTATTttccgatgcc nd [GEA], [APIORCISFBSCS] [3]
sRNA Interaction TU
sRNA TU Regulated Function Binding Sites Regulatory Mechanism Evidence (Confirmed, Strong, Weak) Reference(s)
PosLeft PosRight Target sequence (mRNA)
small regulatory RNA RyhB grxD repressor nd nd nd nd [IMP] [2]