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|
| Operon |  |
|---|---|
| Name: | mdtK |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | mdtK |
| Gene(s): | mdtK Genome Browser M3D Gene expression COLOMBOS |
| Note(s): | The mdtK gene is upregulated by long-term (8 to 12 h) exposure of E. coli to some biocides Merchel Piovesan Pereira B, Wang X, Tagkopoulos I,2020. |
| Evidence: | [COMP-AINF-SINGLE-DIRECTON] Automated inference that a single-gene directon is a transcription unit |
| RNA cis-regulatory element | |
|---|
| Regulation, transcriptional elongation | |
| Attenuator type: | Transcriptional |
| Strand: | forward |
| Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
|---|---|---|---|---|---|
| terminator | -9.1 | 1743302 | 1743339 | gtggaaaacgCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCactggagaat | |
| anti-terminator | -5.44 | 1743282 | 1743314 | tctgttcagcACAATAGCAGGTGGAAAACGCCCTTACCAGTGaaggggtaag | |
| anti-anti-terminator | -4.32 | 1743253 | 1743293 | cttacaactcCTGAAATCAGTTAAGACATTCTGTTCAGCACAATAGCAGGtggaaaacgc |
| Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |