RegulonDB RegulonDB 11.1: Operon Form

mdtK operon and associated TUs in Escherichia coli K-12 genome

Name: mdtK
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: mdtK
Gene(s): mdtK   Genome Browser M3D Gene expression COLOMBOS
Note(s): The mdtK gene is upregulated by long-term (8 to 12 h) exposure of E. coli to some biocides Merchel Piovesan Pereira B, Wang X, Tagkopoulos I,2020.
Evidence: [COMP-AINF-SINGLE-DIRECTON] Automated inference that a single-gene directon is a transcription unit

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -9.1 1743302 1743339 gtggaaaacgCCCTTACCAGTGAAGGGGTAAGAATGGCTATTTTTTCactggagaat
  anti-terminator -5.44 1743282 1743314 tctgttcagcACAATAGCAGGTGGAAAACGCCCTTACCAGTGaaggggtaag
  anti-anti-terminator -4.32 1743253 1743293 cttacaactcCTGAAATCAGTTAAGACATTCTGTTCAGCACAATAGCAGGtggaaaacgc
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"