RegulonDB RegulonDB 10.9: Operon Form

ycgB operon and associated TUs in Escherichia coli K-12 genome

Name: ycgB
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: ycgB
Gene(s): ycgB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
Name: ycgBp
+1: 1237285
Distance from start of the gene: 44
Sequence: atcgcaaagaaaaaaattctccggcgacgcggtttttaacaggtgttctatgcttgaaatGaggtgctccacacagagagc
Evidence: [HTTIM]    
Reference(s): [1] Mendoza-Vargas A., et al., 2009

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Translational
Strand: reverse
Evidence: [ICA] Inferred by computational analysis
Reference(s): [2] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -10.9 1237258 1237286 atgcttgaaaTGAGGTGCTCCACACAGAGAGCGCCGACaacaatgagg
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"