RegulonDB RegulonDB 10.10: Operon Form

ydeJ operon and associated TUs in Escherichia coli K-12 genome

Name: ydeJ
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: ydeJ
Gene(s): ydeJ   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
Name: ydeJp
+1: 1624688
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 85
Sequence: atttaactcactaaagttaagaagattgaaaagtcttaaacatattttcagaataatcggAtttatatgtttgaaaattat
                          -35                       -10     +1                   
Evidence: [AIPP]
Reference(s): [1] Huerta AM., et al., 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote FNR activator ydeJp 1624277 1624290 -404.5 gtcctctcctTTGTGAGAAATCAAattaccgcgt nd [AIBSCS] [2]