RegulonDB RegulonDB 11.1: Operon Form

ydiP operon and associated TUs in Escherichia coli K-12 genome

Name: ydiP
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: ydiP
Gene(s): ydiP   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF-SINGLE-DIRECTON] Automated inference that a single-gene directon is a transcription unit
Name: ydiPp
+1: 1779328
Distance from start of the gene: 27
Sequence: gctaaacgcggttgtataaccgcaatacacgccgtattttatccggcatatattgtttttGcttgctcatggaatagggag
Reference(s): [1] Mendoza-Vargas A., et al., 2009

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -8.3 1779347 1779381 ctcgctaaacGCGGTTGTATAACCGCAATACACGCCGTATTTTAtccggcatat
  anti-terminator -12.6 1779374 1779407 ttcagtgtaaATAATCTTGTTTAGCTCTCGCTAAACGCGGTTGtataaccgca
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"