RegulonDB RegulonDB 10.9: Operon Form
   

yjjZ operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: yjjZ
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: yjjZ
Gene(s): yjjZ   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: yjjZp
+1: 4605777
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 27
Sequence: cccgatagcaagggatttatctggcttgcaaatgataaaaattatcatatgatattggttAtcattatcaatgaaagagat
                          -35                   -10         +1                   
Note(s): The yjjZp promoter is significantly affected by ectopic production of a nanoRNase during stationary-phase growth Vvedenskaya IO,2012
Evidence: [ICWHO]
[TIM]
Reference(s): [1] Vassinova N., et al., 2000
[2] Vvedenskaya IO., et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Fur-Fe2+ repressor yjjZp 4605743 4605757 -27.0 ttatctggctTGCAAATGATAAAAATtatcatatga nd [APIORCISFBSCS], [BPP], [GEA], [AIBSCS], [BPP], [GEA] [1], [5], [6]
proximal Fur-Fe2+ repressor yjjZp 4605772 4605786 3.0 catatgatatTGGTTATCATTATCAAtgaaagagat nd [APIORCISFBSCS], [BPP], [GEA], [AIBSCS], [BPP], [GEA] [1], [5], [6]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal OxyR activator yjjZp 4605707 4605723 -62.0 taatcatagcGATAGGTTTACCCGATAGcaagggattt nd [APIORCISFBSCS], [BPP], [GEA], [CEEUMA], [IHBCE], [RSE] [3], [4]





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