RegulonDB RegulonDB 10.9: Operon Form
   

ynaI operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ynaI
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: ynaI
Gene(s): ynaI   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: ynaIp
+1: 1395973
Distance from start of the gene: 51
Sequence: ttgctacttccttccctgactattgatgatctgaatgaattgtcgcggtaaaatagccccGccaggggtttccggcatgac
Evidence: [HTTIM]
Reference(s): [1] Mendoza-Vargas A., et al., 2009


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Translational
Strand: reverse
Evidence: [ICA] Inferred by computational analysis
Reference(s): [2] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -10.3 1395932 1395969 agccccgccaGGGGTTTCCGGCATGACGACAATTATCTGGAGGAGCCtgataaaaca
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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