RegulonDB RegulonDB 10.8: Operon Form
   

yncE operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: yncE
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: yncE
Gene(s): yncE   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISDTU] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: yncEp
+1: 1523227
Distance from start of the gene: 80
Sequence: gtagtcgtaacggcaagaaatgctccacatttgagaaaataatgattaccattcccatttAtaacaagagcgtaacgatga
Evidence: [HTIM]
Reference(s): [1] Mendoza-Vargas A., et al., 2009
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal MarA activator yncEp 1523176 1523196 -41.5 tgtagtcgtaACGGCAAGAAATGCTCCACATttgagaaaat nd [APIORCISFBSCS], [CV(GEA/ROMA)], [GEA] [2]





RegulonDB