RegulonDB RegulonDB 10.9: Operon Form
   

uidABC operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: uidABC
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: uidABC
Gene(s): uidC, uidB, uidA   Genome Browser M3D Gene expression COLOMBOS
Reference(s): [1] Blanco C., et al., 1982
[2] Blattner FR., et al., 1997
Promoter
Name: uidAp
+1: 1696152
Distance from start of the gene: 81
Sequence: gttttttgatcgcggtgtcagttctttttatttccatttctcttccatgggtttctcacaGataactgtgtgcaacacaga
Evidence: [TIM]
Reference(s): [3] Blanco C. 1987
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cAMP activator uidAp 1696231 1696253 -89.5 gttttaaagaTTAATGCGATCTATATCACGCTGtgggtattgc nd [AIBSCS], [APIORCISFBSCS], [GEA] [4], [6]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote UidR1 repressor uidAp 1696298 1696313 -153.5 atcgttcccaATACGCTCGAACGAACGttcggttgct nd [GEA] [4], [5]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal UxuR1 repressor uidAp 1696116 1696133 28.5 tgtgcaacacAGAATTGGTTAACTAATCAgattaaaggt nd [APIORCISFBSCS], [GEA] [4], [5]
Note(s): 1Expression of the regulated gene is affected as a result of mutating the regulatory protein. Note that this evidence does not eliminate the possibility of an indirect effect of the regulator on the regulated gene.1Expression of the regulated gene is affected as a result of mutating the regulatory protein. Note that this evidence does not eliminate the possiblity of an indirect effect of the regulator on the regulated gene.1Expression of the regulated gene is affected as a result of mutating the regulatory protein. Note that this evidence does not eliminate the possibility of an indirect effect of the regulator on the regulated gene.
3Expression of the regulated gene is affected as a result of mutating the regulatory protein. Note that this evidence does not eliminate the possiblity of an indirect effect of the regulator on the regulated gene.





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