RegulonDB RegulonDB 11.1: Operon Form

ykiA operon and associated TUs in Escherichia coli K-12 genome

Name: ykiA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: ykiA
Gene(s): ykiA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF] Inferred computationally without human oversight
Name: ykiAp
+1: 408574
Distance from start of the gene: 35
Sequence: tagcccataataatatttcctttgctgcgattttttcaatttccgatatattcataatttAtcaaggttgatataaatatc
Reference(s): [1] Salscheider SL., et al., 2014
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal RcsB-BglJ activator ykiAp 408486 408506 -78.5 cttgaacgggAGGGCATTTTTCTGAAATATCctttctttag nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] W [1]