RegulonDB RegulonDB 11.1: Operon Form

nohA-stfQ-tfaQ operon and associated TUs in Escherichia coli K-12 genome

Name: nohA-stfQ-tfaQ
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: nohA-stfQ-tfaQ
Gene(s): tfaQ, stfQ, nohA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF] Inferred computationally without human oversight
Name: nohAp
+1: 1636603
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 236
Sequence: cataattgattatttgacgtggtttgatggcctccacgcacgttgtgatatgtagatgatAatcattatcactttacgggt
Reference(s): [1] Vassinova N., et al., 2000
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Fur-Fe2+ repressor nohAp 1636591 1636609 4.0 gtgatatgtaGATGATAATCATTATCACTttacgggtcc nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] W [1], [2]
proximal Fur-Fe2+ repressor nohAp 1636593 1636611 2.0 ttgtgatatgTAGATGATAATCATTATCActttacgggt nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] W [1]