RegulonDB RegulonDB 10.10: Operon Form

nepI operon and associated TUs in Escherichia coli K-12 genome

Name: nepI
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: nepI
Gene(s): nepI   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
[ICWHO] Inferred computationally without human oversight
Reference(s): [1] Gronskiy SV., et al., 2005
Name: nepIp
+1: 3841771
Distance from start of the gene: 32
Sequence: acaccgtaaaagttgcaaaaacgttaaatgcgtcacacatttcaatgttaaagtggtcggCttttcccctgaaacatgcca
Evidence: [HIPP]
Reference(s): [1] Gronskiy SV., et al., 2005
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal SoxS activator nepIp 3841756 3841775 6.0 gttaaagtggTCGGCTTTTCCCCTGAAACAtgccacgggt nd [RSE], [CEEUMA], [IHBCE] [2]