RegulonDB RegulonDB 10.10: Operon Form
   

yifL-dapF-yigA-xerC-yigB operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: yifL-dapF-yigA-xerC-yigB
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: yifL-dapF-yigA-xerC-yigB
Gene(s): yifL, dapF, yigA, xerC, yigB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: yifLp
+1: 3994492
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 30
Sequence: acttcataaagagtcgctaaacgcttgcttttacgtcttctcctgcgatgatagaaagcaGaaagcgatgaactttacagg
                         -35                   -10          +1                   
Evidence: [HIPP]
[ICWHO]
[TIM]
Reference(s): [1] Huerta AM., et al., 2003
[2] Richaud C., et al., 1988


Evidence    

 [HIPP] Human inference of promoter position

 [ICWHO] Inferred computationally without human oversight

 [TIM] Transcription initiation mapping


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

 [2] Richaud C., Printz C., 1988, Nucleotide sequence of the dapF gene and flanking regions from Escherichia coli K12., Nucleic Acids Res 16(21):10367

RegulonDB