RegulonDB RegulonDB 10.9: Operon Form

yhdJ operon and associated TUs in Escherichia coli K-12 genome

Name: yhdJ
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: yhdJ
Gene(s): yhdJ   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -15.8 3411595 3411630 ttgattaaaaAGGCGCTACTCGGCATGGGGAAGCGCCTTTTTTATaggtgtcaca
  anti-terminator -5.2 3411569 3411608 tgaactaattCAGGTTAGCTAAATGCTTGATTAAAAAGGCGCTACTCGGcatggggaag
  anti-anti-terminator -6.6 3411556 3411586 aaaaaatacgGCATGAACTAATTCAGGTTAGCTAAATGCTtgattaaaaa
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"