RegulonDB RegulonDB 10.9: Operon Form

mscL operon and associated TUs in Escherichia coli K-12 genome

Name: mscL
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: mscL
Gene(s): mscL   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
[LTED] Length of transcript experimentally determined
Reference(s): [1] Kawano M., et al., 2005
Name: mscLp
+1: 3438001
Distance from start of the gene: 23
Sequence: aggattaattaaattcattcctggcaggaaaatggcttaacatttgttagacttatggttGtcggcttcatagggagaata
Evidence: [HTTIM]    
Reference(s): [2] Mendoza-Vargas A., et al., 2009

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -13.9 3437899 3437926 tgtaattaatAAGGCGTCTAATGACGCCTTATTATTTccctttgatt
  anti-terminator -3.22 3437862 3437908 gacgtcgaaaGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTaatgacgcct
  anti-anti-terminator -4.9 3437853 3437867 tttattaccgACGTCGAAAGACTCttccagccaa
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"