RegulonDB RegulonDB 11.1: Operon Form

avtA operon and associated TUs in Escherichia coli K-12 genome

Name: avtA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: avtA
Gene(s): avtA   Genome Browser M3D Gene expression COLOMBOS
Note(s): Alanine and leucine modestly repressed the avtA and alaA genes via Lrp Kim SH,2010
Evidence: [COMP-AINF] Inferred computationally without human oversight
Name: avtAp
+1: 3739674
Distance from start of the gene: 31
Sequence: accgctcactcttcaacagaccgatttgcaccccagcaaatgtagcgttattgttaccttCcttgctacagagttcgacag
Reference(s): [1] Mendoza-Vargas A., et al., 2009
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd Lrp-L-leucine repressor avtAp nd nd nd nd nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-RNA-SEQ], [EXP-CHIP-SEQ] W [2], [3]