|
|
| Operon |  |
|---|---|
| Name: | queF |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | queF |
| Gene(s): | queF Genome Browser M3D Gene expression COLOMBOS |
| Note(s): | It has been observed that the transcriptional regulator IHF binds near the start gene of queF Kasho K,2021. |
| Evidence: | [COMP-AINF] Inferred computationally without human oversight |
| Promoter | |
| Name: | queFp |
| +1: | 2925321 |
| Distance from start of the gene: | 27 |
| Sequence: |
tgtgcggtcaaatcgtccactaatttctctcttcacttaaaccagatacacttgtcgtttAgtttatctggtttatgacgg |
| Evidence: | [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP] |
| Reference(s): | [1] Mendoza-Vargas A., et al., 2009 |
| RNA cis-regulatory element | |
|---|
| Regulation, transcriptional elongation | |
| Attenuator type: | Translational |
| Strand: | forward |
| Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
|---|---|---|---|---|---|
| terminator | -11.8 | 2925301 | 2925332 | ttcacttaaaCCAGATACACTTGTCGTTTAGTTTATCTGGTttatgacggt |
| Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |
[EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP] High-throughput transcription initiation mapping