RegulonDB RegulonDB 10.9: Operon Form

yeiP operon and associated TUs in Escherichia coli K-12 genome

Name: yeiP
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: yeiP
Gene(s): yeiP   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Name: yeiPp
+1: 2265417
Distance from start of the gene: 33
Sequence: accagcaaaagtgcgaataccacttgcccgaaaggcccgtcgcgagtactttgtcgcgatAtttttgacattttcgactac
Evidence: [HTTIM]
Reference(s): [1] Raghavan R., et al., 2011
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cAMP activator yeiPp 2265362 2265384 -44.5 tttgcaccagCAAAAGTGCGAATACCACTTGCCcgaaaggccc nd [AIBSCS], [GEA] [1]

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -8.5 2265395 2265423 gaaaggcccgTCGCGAGTACTTTGTCGCGATATTTTTGacattttcga
  anti-terminator -8.4 2265378 2265403 gcgaataccaCTTGCCCGAAAGGCCCGTCGCGAGTactttgtcgc
  anti-anti-terminator -9.52 2265333 2265386 attgatgagcGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGaaaggcccgt
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"