RegulonDB RegulonDB 10.10: Operon Form

yfdPQ operon and associated TUs in Escherichia coli K-12 genome

Name: yfdPQ
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: yfdPQ
Gene(s): yfdP, yfdQ   Genome Browser M3D Gene expression COLOMBOS
Note(s): A transcript that contains yfdQ is increased after σE induction, as observed in high-throughput analysis of gene expression Lacoux C,2020.
Evidence: [ICWHO] Inferred computationally without human oversight

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -8.5 2473424 2473445 agattctgacGGGTGAAAACCCGATTTTTTGccagatttcg
  anti-terminator -8.5 2473407 2473430 actgacggatCCCCGCCAGATTCTGACGGGTGAaaacccgatt
  anti-anti-terminator -10.8 2473373 2473418 aggttttttaTCTGACGGATCATGTTTTGATTTTACTGACGGATCCCCGCCAGATtctgacgggt
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"