RegulonDB RegulonDB 10.9: Operon Form

yobD operon and associated TUs in Escherichia coli K-12 genome

Name: yobD
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: yobD
Gene(s): yobD   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
Evidence: [ICA] Inferred by computational analysis
Reference(s): [1] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -15.4 1904763 1904789 gtacactaccGGGGCCTTTTGGCCCCGTTTTTTTATctggaggatt
  anti-terminator -11.9 1904729 1904769 tacgcttgcgGCCTGCTGGGACTGTAAGACTGTTGTACACTACCGGGGCCttttggcccc
  anti-anti-terminator -9.1 1904724 1904747 ctggttacgcTTGCGGCCTGCTGGGACTGTAAGactgttgtac
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"