RegulonDB RegulonDB 11.1: Operon Form

lpxM operon and associated TUs in Escherichia coli K-12 genome

Name: lpxM
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: lpxM
Gene(s): lpxM   Genome Browser M3D Gene expression COLOMBOS
Note(s): The transcript of lpxM is increased after σE induction, as observed in high-throughput analysis of gene expression Lacoux C,2020.
Evidence: [COMP-AINF] Inferred computationally without human oversight

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -16.0 1940263 1940297 atccattcgcAGCCGGTACGCAGTCAGTACCGGCTTTTTTTATTtggtgcgggg
  anti-terminator -9.2 1940291 1940334 aagagattgtGCCGCAGCTACGGTTTGATTAATTAACATCCATTCGCAGCCGGtacgcagtca
  anti-anti-terminator -13.9 1940321 1940371 accggctccgATCGTCGCGAATTCCTGGCGCAGGCCAAAGAGATTGTGCCGCAGCTACGGtttgattaat
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"