RegulonDB RegulonDB 10.9: Operon Form

mgsA operon and associated TUs in Escherichia coli K-12 genome

Name: mgsA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: mgsA
Gene(s): mgsA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Name: mgsAp
+1: 1027041
Distance from start of the gene: 26
Sequence: gcctgtgcgcaggctttttcggtctttatcttgcagcgataagtgcttacagtaatctgtAggaaagttaactacggatgt
Evidence: [HTTIM]    
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Salgado H, et al., 2012

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -7.5 1027082 1027101 agatttttgtGCCTGTGCGCAGGCTTTTTcggtctttat
  anti-terminator -12.3 1027093 1027142 aatactttccTGCAGTGGGCGGAAAAACAACCATCTTCCTGAGATTTTTGTGCCTGTGCgcaggctttt
  anti-anti-terminator -10.0 1027131 1027169 tttaaactggCTGACCCACAAACGCGAAATACTTTCCTGCAGTGGGCGgaaaaacaac
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"