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Name: | yceJI |
Gene(s): | yceI, yceJ Genome Browser M3D Gene expression COLOMBOS |
Note(s): | Analysis of gene expression has proved that under NlpE lipoprotein overexpression, the presence of the protein CpxR causes increased transcription of the yceJ gene; however, no DNA sequence related to the consensus DNA-binding site of CpxR has been identified in the regulatory region of the gene. Therefore, the effect of CpxR on yceJ is probably indirect Raivio TL,2013 |
Evidence: | [ICWHO] Inferred computationally without human oversight [ITCR] Inferred through co-regulation |
Reference(s): | [1] Nonaka G., et al., 2006 |
Promoter | |
Name: | yceJp |
+1: | 1119071 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 25 |
Sequence: |
atcattcaatttgttatttttgtgttgcaattcattctccgacacgccattttctttctcTcgcaaattcgttttggatgc -35 -10 +1 |
Evidence: |
[AIPP] [ICWHO] [IDA] |
Reference(s): |
[2] Huerta AM., et al., 2003 [1] Nonaka G., et al., 2006 |
Name: | yceJI |
Gene(s): | yceI, yceJ Genome Browser M3D Gene expression COLOMBOS |
Note(s): | Analysis of gene expression has proved that under NlpE lipoprotein overexpression, the presence of the protein CpxR causes increased transcription of the yceJ gene; however, no DNA sequence related to the consensus DNA-binding site of CpxR has been identified in the regulatory region of the gene. Therefore, the effect of CpxR on yceJ is probably indirect Raivio TL,2013 |
Evidence: | [ICWHO] Inferred computationally without human oversight [ITCR] Inferred through co-regulation |
Reference(s): | [1] Nonaka G., et al., 2006 |
Promoter | |
Name: | yceJp2 |
+1: | 1119071 |
Sigma Factor: | Sigma32 Sigmulon |
Distance from start of the gene: | 25 |
Sequence: |
atcattcaatttgttatttttgtgttgcaattcattctccgacacgccattttctttctcTcgcaaattcgttttggatgc -35 -10 +1 |
Evidence: |
[AIPP] [ICWHO] [IDA] |
Reference(s): |
[2] Huerta AM., et al., 2003 [1] Nonaka G., et al., 2006 |
Name: | yceI |
Gene(s): | yceI Genome Browser M3D Gene expression COLOMBOS |
Note(s): | Analysis of gene expression has proved that under NlpE lipoprotein overexpression, the presence of the protein CpxR causes increased transcription of the yceI gene; however, no DNA sequence related to the consensus DNA-binding site of CpxR has been identified in the regulatory region of the gene. Therefore, the effect of CpxR on yceI is probably indirect Raivio TL,2013 |
Evidence: | [IC] Inferred by curator |
Reference(s) |
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