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|
| Operon |  |
|---|---|
| Name: | yceJI |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | yceJI |
| Gene(s): | yceI, yceJ Genome Browser M3D Gene expression COLOMBOS |
| Note(s): | Analysis of gene expression has proved that under NlpE lipoprotein overexpression, the presence of the protein CpxR causes increased transcription of the yceJ gene; however, no DNA sequence related to the consensus DNA-binding site of CpxR has been identified in the regulatory region of the gene. Therefore, the effect of CpxR on yceJ is probably indirect Raivio TL,2013 |
| Evidence: | [ICWHO] Inferred computationally without human oversight [ITC] Inferred through co-regulation |
| Reference(s): | [1] Nonaka G., et al., 2006 |
| Promoter | |
| Name: | yceJp |
| +1: | 1119071 |
| Sigma Factor: | Sigma32, Sigma70 |
| Distance from start of the gene: | 25 |
| Sequence: |
atcattcaatttgttatttttgtgttgcaattcattctccgacacgccattttctttctcTcgcaaattcgttttggatgc -35 -10 +1 |
| Evidence: |
[AIPP] [IDA] |
| Reference(s): | [1] Nonaka G., et al., 2006 |
| Gene(s): | yceI Genome Browser M3D Gene expression COLOMBOS |
| Note(s): | Analysis of gene expression has proved that under NlpE lipoprotein overexpression, the presence of the protein CpxR causes increased transcription of the yceI gene; however, no DNA sequence related to the consensus DNA-binding site of CpxR has been identified in the regulatory region of the gene. Therefore, the effect of CpxR on yceI is probably indirect Raivio TL,2013 |
| Evidence: | [IC] Inferred by curator |
[AIPP] Automated inference of promoter position