RegulonDB RegulonDB 10.9: Operon Form
   

solA-yceO operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: solA-yceO
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: solA-yceO
Gene(s): yceO, solA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: solAp
+1: 1120609
Distance from start of the gene: 23
Sequence: caccggtgcctttaccatttctgggttgtatatctgcattcagttaattactctgcttaaAccatgagagcagagagaaaa
Evidence: [HTTIM]    
Reference(s): [1] Mendoza-Vargas A., et al., 2009


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
Evidence: [ICA] Inferred by computational analysis
Reference(s): [2] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -7.1 1120772 1120807 ggtcagacgcTCTGGTTAACCACTGATGTTGCCAGACAATTTATTtcgatattag
  anti-terminator -6.9 1120798 1120820 agggactgaaGTTGGTCAGACGCTCTGGTTAAccactgatgt
  anti-anti-terminator -13.4 1120810 1120867 ctgatgttgcGTTTGCACTACCAGACCCCAAATAAGTCCGAGCAGGAAGGGACTGAAGTTGGTCAGAcgctctggtt
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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