RegulonDB RegulonDB 10.9: Operon Form
   

dinI operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: dinI
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: dinI
Gene(s): dinI   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: dinIp
+1: 1121509
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 22
Sequence: aaacaataaaaatcgtagcttcctgttgtcattaggttattttacctgtataaataaccaGtatattcaacagggggctat
                                                 -10        +1                   
Evidence: [HTTIM]
[IHBCE]
Reference(s): [1] Maciag A., et al., 2011
[2] Yasuda T., et al., 1996
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal LexA repressor dinIp 1121507 1121526 -7.5 taggttatttTACCTGTATAAATAACCAGTAtattcaacag nd [AIBSCS], [APIORCISFBSCS], [BPP], [GEA], [IHBCE], [SM] [2]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal NagC1 repressor dinIp 1121512 1121534 -14.0 gttgtcattaGGTTATTTTACCTGTATAAATAACcagtatattc nd [AIBSCS] nd
Note(s): 1This binding site was determined from a computational prediction based on different statistical methods Oberto J.,2010 The function of the binding site was assigned according to the distance from the transcription start, with NagC as the transcriptional repressor.1This binding site was determined from a computational prediction based on different statistical methods Oberto J.,2010 The function of the binding site was assigned according to the distance from the transcription start, with NagC as the transcriptional repressor.





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