RegulonDB RegulonDB 10.10: Operon Form

ychE operon and associated TUs in Escherichia coli K-12 genome

Name: ychE
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: ychE
Gene(s): ychE   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
Evidence: [ICA] Inferred by computational analysis
Reference(s): [1] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -6.9 1298515 1298548 ggtgaaaaatGCTGTCAAAAGGCGTATTGTCAGCGCGTCTTTTcaaccttatt
  anti-terminator -8.59 1298481 1298522 aataacgaatGATAGCAATTTTAAGTAGTTAGGAGGTGAAAAATGCTGTCAaaaggcgtat
  anti-anti-terminator -4.64 1298439 1298487 gatttggtggCTACATTAGCATGTTTTGCACAACTAGATAACAATAACGAATGATAGCaattttaagt
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"