RegulonDB RegulonDB 10.8: Operon Form

rhsC-ybfB operon and associated TUs in Escherichia coli K-12 genome

Name: rhsC-ybfB
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Gene(s): rhsC, ybfB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight

Regulation by sRNA    
  Small RNA name (Regulator) Regulation type Mechanism Function Binding Sites Evidence Reference
LeftPos RightPos Sequence (RNA-strand)
  gcvB unknown unknown repressor       [IMP] [1]
Notes: "The provided sequence is that of the RNA strand,i.e. 'U's are showed instead the 'T'"

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -24.8 729365 729396 tacattgaaaACCGCCAGCGGAAACGCTGGCGGTTTTTTGTatcaggaaga
  anti-terminator -7.2 729341 729376 ttttattgatTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGaaacgctggc
  anti-anti-terminator -5.7 729322 729350 cgaaaaggcaACTGGTGATTTTTATTGATTGCTGAGTTttgaatacat
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"