RegulonDB RegulonDB 10.9: Operon Form
   

rhsC-ybfB operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: rhsC-ybfB
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: rhsC-ybfB
Gene(s): rhsC, ybfB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
Evidence: [ICA] Inferred by computational analysis
Reference(s): [1] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -24.8 729365 729396 tacattgaaaACCGCCAGCGGAAACGCTGGCGGTTTTTTGTatcaggaaga
  anti-terminator -7.2 729341 729376 ttttattgatTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGaaacgctggc
  anti-anti-terminator -5.7 729322 729350 cgaaaaggcaACTGGTGATTTTTATTGATTGCTGAGTTttgaatacat
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"



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