RegulonDB RegulonDB 10.10: Operon Form

nadC operon and associated TUs in Escherichia coli K-12 genome

Name: nadC
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: nadC
Gene(s): nadC   Genome Browser M3D Gene expression COLOMBOS
Note(s): A potential RNA G-quadruplex structure, formed by guanine-rich sequences located in the coding sequence region of the gene, was identified for nadC . This structure could regulate the expression of the gene, as observed for hemL gene expression Shao X, Zhang W, Umar MI, Wong HY, Seng Z, Xie Y, Zhang Y, Yang L, Kwok CK, Deng X,2020.
Evidence: [ICWHO] Inferred computationally without human oversight
Name: nadCp
+1: 118663
Distance from start of the gene: 18
Sequence: ccttatatgtggtgctaatacccggttcagagtagcatgtttctaccttatgattcgttaGctatctggagttttaacatg
Evidence: [HTTIM]
Reference(s): [1] Raghavan R., et al., 2011
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cyclic-AMP activator nadCp 118698 118720 -45.5 aggatctcctTATATGTGGTGCTAATACCCGGTtcagagtagc nd [GEA], [AIBSCS] [1]