RegulonDB RegulonDB 11.1: Operon Form
   

mtn-btuF-yadS operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: mtn-btuF-yadS
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: mnt-btuF-yadS
Gene(s): yadS, btuF, mtn   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF] Inferred computationally without human oversight
Promoter
Name: mtnp2
+1: 179183
Sigma Factor: Sigma38 Sigmulon
Distance from start of the gene: 30
Sequence: gtgccatgtcctctcccgcgtgagaaatacgcttccccgtaagcgcatggtaaactatgcCttcaaatcgggcttatcgcg
                                 -35                    -10 +1                   
Note(s): The mtnp promoter is activated in the stationary phase and under
hyperosmotic shock. There is interference between the
mtnp and dgtp promoters, because they overlap Kim Y,2006.
Evidence: [COMP-AINF]
[COMP-HINF-POSITIONAL-IDENTIFICATION]
[COMP-HINF-SIMILAR-TO-CONSENSUS]
[EXP-IDA-TRANSCRIPTION-INIT-MAPPING]
Reference(s): [1] Huerta AM., et al., 2003
[2] Kim Y., et al., 2006


Transcription unit       
Name: mnt-btuF-yadS
Gene(s): yadS, btuF, mtn   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF] Inferred computationally without human oversight
Promoter
Name: mtnp
+1: 179183
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 30
Sequence: gtgccatgtcctctcccgcgtgagaaatacgcttccccgtaagcgcatggtaaactatgcCttcaaatcgggcttatcgcg
                                -35                     -10 +1                   
Note(s): The mtnp promoter is activated in the stationary phase and under
hyperosmotic shock. There is interference between the
mtnp and dgtp promoters, because they overlap Kim Y,2006.
Evidence: [COMP-AINF]
[COMP-HINF-POSITIONAL-IDENTIFICATION]
[COMP-HINF-SIMILAR-TO-CONSENSUS]
[EXP-IDA-TRANSCRIPTION-INIT-MAPPING]
Reference(s): [1] Huerta AM., et al., 2003
[2] Kim Y., et al., 2006





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