![]() ![]() ![]() ![]() |
Gene(s): | dsbG Genome Browser M3D Gene expression COLOMBOS | ||||||||||
Note(s): | Expression of dsbG is activated by OxyR. This is also true for the expression of the divergently transcribed ahpC. The intergenic region between dsbG and ahpC carries two binding sites for OxyR, a dsbG-proximal site, located 54 bp upstream of the dsbG start codon, and an ahpC-proximal site, located 290 bp upstream of the dsbG start codon Zheng M,2001 Northern blotting and primer extension assays showed that OxyR binding to the ahpC-proximal site leads to the induction of both dsbG and ahpC transcripts, while OxyR binding to the dsbG-proximal site leads to the induction of a second ahpC transcript. This transcript of ahpC and the transcript of dsbG overlap by over 100 nucleotides Zheng M,2001 |
||||||||||
Evidence: | [COMP-AINF] Inferred computationally without human oversight | ||||||||||
Promoter | |||||||||||
Name: | dsbGp | ||||||||||
+1: | 638800 | ||||||||||
Distance from start of the gene: | 227 | ||||||||||
Sequence: |
aagttttaccttacaaccttcgtaagacaactttgtgaactttgcaccgccagcggcgatAaaaagtaaaatggccccctt |
||||||||||
Evidence: | [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] | ||||||||||
Reference(s): | [1] Zheng M., et al., 2001 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
proximal | OxyR | activator | dsbGp | 638847 | 638863 | -55.0 | ttatcaaatcGATAAGTTTTACCTTACaaccttcgta | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [1] |
proximal | OxyR | activator | dsbGp | 638869 | 638885 | -77.0 | cgattcggctAATGCGTTTCCATTATCaaatcgataa | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [1], [2] |
Reference(s) |
![]() |
---|---|