Name: |
lsrRK |
Gene(s): |
lsrK, lsrR
Genome Browser
M3D Gene expression
COLOMBOS
|
Evidence: |
[EXP-IDA-TRANSCRIPT-LEN-DETERMINATION] Length of transcript experimentally determined |
Reference(s): |
[1] Wang L., et al., 2005
|
Promoter |
|
Name: |
lsrRp |
+1: |
1601257 |
Sigma Factor: |
Sigma70 Sigmulon |
Distance from start of the gene: |
16
|
Sequence: |
ccatcacagatataaatgagcaagaactgaacaattgcattaaagatttaaatatgttcaAagtgaagaatgaattatgac -35 -1+1
|
Note(s): |
Wang et al. demonstrated in 2005 that lrsK could be transcribed together with lrsR Wang L,2005. |
Evidence: |
[COMP-AINF] [COMP-AINF-POSITIONAL-IDENTIFICATION] [EXP-IEP]
|
Reference(s): |
[2] Huerta AM., et al., 2003 [1] Wang L., et al., 2005
|
Type |
Transcription factor |
Function |
Promoter |
Binding Sites |
Growth Conditions |
Evidence |
Confidence level (C: Confirmed, S: Strong, W: Weak) |
Reference(s) |
LeftPos |
RightPos |
Central Rel-Pos |
Sequence |
proximal |
CRP-cyclic-AMP
|
activator |
lsrRp |
1601307
|
1601328
|
-60.5
|
cgtagagtcaAACTGTGGTTGCCATCACAGATataaatgagc |
nd
|
[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IMP-SITE-MUTATION], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IMP-SITE-MUTATION]
|
C
|
[1], [3]
|
remote |
CRP-cyclic-AMP
|
activator |
lsrRp |
1601378
|
1601399
|
-131.5
|
ttgcacatatTTCCGACGAATAGATCACAATTtatgctattt |
nd
|
[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IMP-SITE-MUTATION], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION]
|
C
|
[3]
|