RegulonDB RegulonDB 10.9: Operon Form

ybjO-rlmC operon and associated TUs in Escherichia coli K-12 genome

Name: ybjO-rlmC
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: ybjO-rlmC
Gene(s): ybjO, rlmC   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
Evidence: [ICA] Inferred by computational analysis
Reference(s): [1] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -12.5 897961 897987 ggctacataaTGCCGCGCATGTCGCGGCATTGTTTTcatggaagac
  anti-terminator -4.0 897951 897966 ttgccaacctGGCTACATAATGCCGcgcatgtcgc
  anti-anti-terminator -6.23 897915 897954 atccagcgtgCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCtacataatgc
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"