RegulonDB RegulonDB 10.8: Operon Form
   

mlaFEDCB operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: mlaFEDCB
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: mlaFEDCB
Gene(s): mlaB, mlaC, mlaD, mlaE, mlaF   Genome Browser M3D Gene expression COLOMBOS
Evidence: [PAGTSBP] Products of adjacent genes in the same biological process
Reference(s): [1] Malinverni JC., et al., 2009
Promoter
Name: mlaFp3
+1: 3340102
Distance from start of the gene: 37
Sequence: tcgctaaccacggcgggtaatattctgtaaatatgttgggttcaaggttaaattgagcgcCatgcttagaaaatcaacgca
Evidence: [TIM]
Reference(s): [2] Sharma P., et al., 2017


Transcription unit          
Name: mlaFEDCB
Gene(s): mlaB, mlaC, mlaD, mlaE, mlaF   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
[PAGTSBP] Products of adjacent genes in the same biological process
Reference(s): [1] Malinverni JC., et al., 2009
Promoter
Name: mlaFp2
+1: 3340121
Distance from start of the gene: 56
Sequence: gtaaaacaaatgccagctttcgctaaccacggcgggtaatattctgtaaatatgttgggtTcaaggttaaattgagcgcca
Evidence: [TIM]
Reference(s): [2] Sharma P., et al., 2017
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal MarA activator mlaFp2 3340155 3340170 -41.5 taaaacaaatGCCAGCTTTCGCTAACcacggcgggt nd [BPP], [CV(CHIP-SV/GEA/ROMA)], [CV(GEA/ROMA)], [GEA], [ICWHO] [2]


Transcription unit       
Name: mlaFEDCB
Gene(s): mlaB, mlaC, mlaD, mlaE, mlaF   Genome Browser M3D Gene expression COLOMBOS
Evidence: [PAGTSBP] Products of adjacent genes in the same biological process
Reference(s): [1] Malinverni JC., et al., 2009
Promoter
Name: mlaFp1
+1: 3340132
Distance from start of the gene: 67
Sequence: gcggctaaaaagtaaaacaaatgccagctttcgctaaccacggcgggtaatattctgtaaAtatgttgggttcaaggttaa
Evidence: [TIM]
Reference(s): [2] Sharma P., et al., 2017





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