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Name: | ykgR | ||||||||||
Gene(s): | ykgR Genome Browser M3D Gene expression COLOMBOS | ||||||||||
Note(s): | ykgR gene expression is induced upon heat shock Hemm MR,2010 | ||||||||||
Evidence: | [EXP-IDA-TRANSCRIPT-LEN-DETERMINATION] Length of transcript experimentally determined | ||||||||||
Reference(s): | [1] Hemm MR., et al., 2010 | ||||||||||
Promoter | |||||||||||
Name: | ykgRp | ||||||||||
+1: | 313285 | ||||||||||
Sigma Factor: | Sigma70 Sigmulon | ||||||||||
Distance from start of the gene: | 43 | ||||||||||
Sequence: |
ctattcaaatttgtgatacatgtcaaaaaattggttgaccaaactcgttatttatataagGgcacttacgaagtgcactct -35 -1+1 |
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Evidence: |
[COMP-AINF] [COMP-HINF] [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] |
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Reference(s): |
[1] Hemm MR., et al., 2010 [2] Huerta AM., et al., 2003 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
proximal | CRP-cyclic-AMP | activator | ykgRp | 313316 | 313338 | -41.5 | catctattcaAATTTGTGATACATGTCAAAAAAttggttgacc | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [1] |
Reference(s) |
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