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Name: | fnrS | |||||||||
Gene(s): | fnrS Genome Browser M3D Gene expression COLOMBOS | |||||||||
Note(s): | The RNA produced by the fnrS gene has been observed mainly at the poles of the cell Kannaiah S, Livny J, Amster-Choder O,2019. | |||||||||
Evidence: | [BTEI] Boundaries of transcription experimentally identified [LTED] Length of transcript experimentally determined |
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Reference(s): | [1] Boysen A., et al., 2010 | |||||||||
Promoter | ||||||||||
Name: | fnrSp | |||||||||
+1: | 1409129 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 0 | |||||||||
Sequence: |
cgccgcaaagtttgagcgaagtcaataaactctctacccattcagggcaatatctctcttGcaggtgaatgcaacgtcaag -35 -10 +1 |
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Evidence: |
[ICWHO] [IHBCE] [RS-EPT-CBR] [TIM] |
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Reference(s): |
[1] Boysen A., et al., 2010 [2] Huerta AM., et al., 2003 [3] Salgado H, et al., 2012 |
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Terminator(s) | ||||||||||
Type: | rho-independent | |||||||||
Sequence: | aattgattcgTACGACGCCGACTTTGATGAGTCGGCTTTTTTTtgcctgttat | |||||||||
Reference(s): | [1] Boysen A., et al., 2010 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | FNR | activator | fnrSp | 1409080 | 1409093 | -42.5 | gccgcaaagtTTGAGCGAAGTCAAtaaactctct | nd | [GEA], [APIORCISFBSCS], [BPP] | [1] |
Reference(s) |
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