|
|
| Operon |  |
|---|---|
| Name: | fnrS |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | fnrS | |||||||||
| Gene(s): | fnrS Genome Browser M3D Gene expression COLOMBOS | |||||||||
| Note(s): | The RNA produced by the fnrS gene has been observed mainly at the poles of the cell Kannaiah S, Livny J, Amster-Choder O,2019. | |||||||||
| Evidence: | [BTEI] Boundaries of transcription experimentally identified [LTED] Length of transcript experimentally determined |
|||||||||
| Reference(s): | [1] Boysen A., et al., 2010 | |||||||||
| Promoter | ||||||||||
| Name: | fnrSp | |||||||||
| +1: | 1409129 | |||||||||
| Sigma Factor: | Sigma70 Sigmulon | |||||||||
| Distance from start of the gene: | 0 | |||||||||
| Sequence: |
cgccgcaaagtttgagcgaagtcaataaactctctacccattcagggcaatatctctcttGcaggtgaatgcaacgtcaag -35 -10 +1 |
|||||||||
| Evidence: |
[ICWHO] [IHBCE] [RS-EPT-CBR] [TIM] |
|||||||||
| Reference(s): |
[1] Boysen A., et al., 2010 [2] Huerta AM., et al., 2003 [3] Salgado H, et al., 2012 |
|||||||||
| Terminator(s) | ||||||||||
| Type: | rho-independent | |||||||||
| Sequence: | aattgattcgTACGACGCCGACTTTGATGAGTCGGCTTTTTTTtgcctgttat | |||||||||
| Reference(s): | [1] Boysen A., et al., 2010 | |||||||||
| Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
|---|---|---|---|---|---|---|---|---|---|---|
| LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
| proximal | FNR | activator | fnrSp | 1409080 | 1409093 | -42.5 | gccgcaaagtTTGAGCGAAGTCAAtaaactctct | nd | [GEA], [APIORCISFBSCS], [BPP] | [1] |
| Reference(s) |
|
|---|---|
[ICWHO] Inferred computationally without human oversight