RegulonDB RegulonDB 11.0: Operon Form

alx operon and associated TUs in Escherichia coli K-12 genome

Name: alx
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: alx
Gene(s): alx   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
[ITCR] Inferred through co-regulation
Reference(s): [1] Nechooshtan G., et al., 2009

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -20.2 3238528 3238564 ataaaaagcaGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATgtgtaaggaa
  anti-terminator -18.7 3238501 3238544 gaccttgccgGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCgacgttggcc
  anti-anti-terminator -22.6 3238483 3238519 cttttttgttGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCAtaaaaagcag
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"