RegulonDB RegulonDB 11.1: Operon Form
   

pgpC-tadA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: pgpC-tadA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: pgpC-tadA
Gene(s): tadA, pgpC   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF] Inferred computationally without human oversight
Promoter
Name: pgpCp
+1: 2698638
Sigma Factor: Sigma32 Sigmulon
Distance from start of the gene: 88
Sequence: tttatattccattgccgctaattgccatgaattaaaaattccagttagccatgatgcggtCgattgttgccggaaaagtga
                                -35                 -10     +1                   
Evidence: [COMP-AINF]
[COMP-AINF-POSITIONAL-IDENTIFICATION]
Reference(s): [1] Huerta AM., et al., 2003
[2] Mendoza-Vargas A., et al., 2009
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote NsrR repressor pgpCp 2698503 2698514 131.0 gttttttgacTTAGATGGAACAttgcatcagc nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] W [3]





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