RegulonDB RegulonDB 11.2: Operon Form

preTA operon and associated TUs in Escherichia coli K-12 genome

Name: preTA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: preTA
Synonym(s): yeiTA
Gene(s): preT, preA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF] Inferred computationally without human oversight
[IC-ADJ-GENES-SAME-BIO-PROCESS] Products of adjacent genes in the same biological process
Reference(s): [1] Mihara H., et al., 2008
Name: preTp
+1: 2233989
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 44
Sequence: atcttttcacagtttaaattcccccgcacgcttagccttaatatcagtacattattatttActaaacgctcgccttaatta
Note(s): A putative promoter for the yeiTA operon has been identified 11 bp downstream Mihara H,2008of that reported by Gama et al. (2008) Mendoza-Vargas A,2009
Evidence: [COMP-HINF]
Reference(s): [2] Mendoza-Vargas A., et al., 2009
[1] Mihara H., et al., 2008
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cyclic-AMP activator preTp 2233921 2233943 -57.5 aaccgcagctATTTGTGAATCTTTTCACAGTTTaaattccccc nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] W [1], [3]