RegulonDB RegulonDB 10.8: Operon Form

essD-rrrD-rzpD operon and associated TUs in Escherichia coli K-12 genome

Name: essD-rrrD-rzpD
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: essD-ybcS-rzpD
Gene(s): essD, rrrD, rzpD   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Name: essDp
+1: 576873
Sigma Factor: Sigma24 Sigmulon
Distance from start of the gene: 525
Sequence: ttaattttttcatcgtgagccctttttttgaactattattaaaaaatgatgtcactgcgcGataaatattcatctaatcaa
                             -35                   -10      +1                   
Evidence: [AIPP]
Reference(s): [1] Rhodius VA., et al., 2005
[2] Rueggeberg KG., et al., 2015

Regulation by sRNA    
  Small RNA name (Regulator) Regulation type Mechanism Function Binding Sites Evidence Reference
LeftPos RightPos Sequence (RNA-strand)
  omrB antisense post-transcriptional regulation repressor       [IMP] [3]
Notes: "The provided sequence is that of the RNA strand,i.e. 'U's are showed instead the 'T'"

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Translational
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -13.7 577370 577396 cctcaatttaCACCCGCTTTGTCTGCGAGGTGGGGTtatgaaatcc
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"