RegulonDB RegulonDB 10.9: Operon Form
   

gstA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: gstA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: gstA
Gene(s): gstA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: gstAp
+1: 1714327
Distance from start of the gene: 50
Sequence: cgtaaaattcagggaaactcttttacaagccgctaacttttcgttagcggctttttttttGttcagcaacgcactaccata
Evidence: [HTTIM]    
Reference(s): [1] Mendoza-Vargas A., et al., 2009


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
Evidence: [ICA] Inferred by computational analysis
Reference(s): [2] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -17.3 1714293 1714329 ctcttttacaAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTGTTcagcaacgca
  anti-terminator -7.5 1714259 1714300 ggcgaaagcaGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTaacttttcgt
  anti-anti-terminator -16.3 1714224 1714269 caccgcatgaCGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTaaaattcagg
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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