Name: |
shoB |
Synonym(s): |
ryfB |
Gene(s): |
shoB
Genome Browser
M3D Gene expression
COLOMBOS
|
Evidence: |
[EXP-IDA-TRANSCRIPT-LEN-DETERMINATION] Length of transcript experimentally determined |
Reference(s): |
[1] Kawano M., et al., 2005
|
Promoter |
|
Name: |
shoBp |
+1: |
2700291 |
Sigma Factor: |
Sigma70 Sigmulon |
Distance from start of the gene: |
94
|
Sequence: |
acaccatgccacagaattcccccattgaaacgagtggtgtcgtcaaagctctggtgtggaGtgcagcatgcaccctcaata
|
Evidence: |
[AS] [EXP-IDA-TRANSCRIPTION-INIT-MAPPING]
|
Reference(s): |
[1] Kawano M., et al., 2005
|
sRNA |
TU Regulated |
Function |
Binding Sites |
Regulatory Mechanism |
Evidence (Confirmed, Strong, Weak) |
Reference(s) |
PosLeft |
PosRight |
Target sequence (mRNA) |
small regulatory RNA OhsC
|
shoB
|
repressor
|
2700273
|
2700291
|
UUGAGGGUGCAUGCUGCAC
|
nd
|
[EXP-IMP]
|
[2]
|