RegulonDB RegulonDB 11.0: Operon Form

mcaS operon and associated TUs in Escherichia coli K-12 genome

Name: mcaS
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: mcaS
Synonym(s): isrA
Gene(s): mcaS   Genome Browser M3D Gene expression COLOMBOS
Note(s): The RNA produced by the mcaS gene has been observed mainly in the poles of the cell Kannaiah S, Livny J, Amster-Choder O,2019.
Evidence: [AISGDTU] Automated inference that a single-gene directon is a transcription unit
[LTED] Length of transcript experimentally determined
Reference(s): [1] Thomason MK., et al., 2012
Name: mcaSp
+1: 1405751
Distance from start of the gene: 0
Sequence: cgtgaaatctgtcactgaagaaaattggcaactaaaggttaaaaccgttataacacagtcAccggcgcagaggagacaatg
Evidence: [TIM]
Reference(s): [1] Thomason MK., et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cyclic-AMP activator mcaSp 1405793 1405815 -52.5 gtaacttataTTTTCGTGAAATCTGTCACTGAAgaaaattggc nd [GEA], [APIORCISFBSCS], [BPP] [1]