RegulonDB RegulonDB 10.9: Operon Form
   

bepA-yfgD operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: bepA-yfgD
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: bepA-yfgD
Gene(s): bepA, yfgD   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ITCR] Inferred through co-regulation
Reference(s): [1] Rhodius VA., et al., 2005
Promoter
Name: bepAp2
+1: 2616026
Distance from start of the gene: 68
Sequence: ggattcaggaaactgaaaagtcatttgagtgggctaatcttcgccgttacactcaaaggcGgcgcggtgggaacgatattt
Evidence: [HTTIM]
Reference(s): [2] Mendoza-Vargas A., et al., 2009


Transcription unit       
Name: bepA-yfgD
Synonym(s): yfgCD
Gene(s): bepA, yfgD   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ITCR] Inferred through co-regulation
Reference(s): [1] Rhodius VA., et al., 2005
Promoter
Name: bepAp1
+1: 2616068
Sigma Factor: Sigma24 Sigmulon
Distance from start of the gene: 26
Sequence: gccgttacactcaaaggcggcgcggtgggaacgatatttcacagtatcggtcaaatgactAtctccagaaatacaggatag
                             -35                   -10      +1                   
Note(s): This promoter appears to be induced in two phases after σE induction. It is induced during the first 5 minutes following σE induction, decreased from 5 to 10 minutes, and induced from 10 to 20 minutes Lacoux C,2020.
Evidence: [AIPP]
[ICWHO]
[TIM]
Reference(s): [3] Huerta AM., et al., 2003
[1] Rhodius VA., et al., 2005





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