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Name: | bepA-yfgD |
Gene(s): | bepA, yfgD Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [EXP-IEP-COREGULATION] Inferred through co-regulation |
Reference(s): | [1] Rhodius VA., et al., 2005 |
Promoter | |
Name: | bepAp2 |
+1: | 2616026 |
Distance from start of the gene: | 68 |
Sequence: |
ggattcaggaaactgaaaagtcatttgagtgggctaatcttcgccgttacactcaaaggcGgcgcggtgggaacgatattt |
Evidence: | [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP] |
Reference(s): | [2] Mendoza-Vargas A., et al., 2009 |
Name: | bepA-yfgD |
Synonym(s): | yfgCD |
Gene(s): | bepA, yfgD Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [EXP-IEP-COREGULATION] Inferred through co-regulation |
Reference(s): | [1] Rhodius VA., et al., 2005 |
Promoter | |
Name: | bepAp1 |
+1: | 2616068 |
Sigma Factor: | Sigma24 Sigmulon |
Distance from start of the gene: | 26 |
Sequence: |
gccgttacactcaaaggcggcgcggtgggaacgatatttcacagtatcggtcaaatgactAtctccagaaatacaggatag -35 -10 +1 |
Note(s): | This promoter appears to be induced in two phases after σE induction. It is induced during the first 5 minutes following σE induction, decreased from 5 to 10 minutes, and induced from 10 to 20 minutes Lacoux C,2020. |
Evidence: |
[COMP-AINF] [COMP-AINF-POSITIONAL-IDENTIFICATION] [COMP-AINF-SIMILAR-TO-CONSENSUS] [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] |
Reference(s): |
[3] Huerta AM., et al., 2003 [1] Rhodius VA., et al., 2005 |
Reference(s) |
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