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Name: | yeaM | |||||||||
Gene(s): | nimR Genome Browser M3D Gene expression COLOMBOS | |||||||||
Evidence: | [AISGDTU] Automated inference that a single-gene directon is a transcription unit | |||||||||
Promoter | ||||||||||
Name: | nimRp | |||||||||
+1: | 1875600 | |||||||||
Distance from start of the gene: | 24 | |||||||||
Sequence: |
gttacaaacgaggctgtaccttaccgtttttattgttatgttgaatcaagctaaaatgacAaattatcgctaagttcggac |
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Evidence: | [NTAS] | |||||||||
Reference(s): | [1] Ogasawara H., et al., 2015 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | NimR | repressor | nimRp | 1875574 | 1875595 | 17.0 | atgacaaattATCGCTAAGTTCGGACAAAATGatgcacaggt | nd | [BPP], [GEA], [ICWHO], [BPP], [GS], [ICWHO] | [1], [2] |
proximal | NimR | repressor | nimRp | 1875623 | 1875637 | -29.5 | ctgtaccttaCCGTTTTTATTGTTAtgttgaatca | nd | [BPP], [GEA], [ICWHO], [BPP], [GS], [ICWHO] | [1], [2] |
proximal | NimR | repressor | nimRp | 1875649 | 1875667 | -57.5 | gtcatatgctTCTCATTGTTACAAACGAGgctgtacctt | nd | [BPP], [GEA], [ICWHO], [BPP], [GS], [ICWHO] | [1], [2] |
Reference(s) |
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