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Name: | tcyP | ||||||||||
Gene(s): | tcyP Genome Browser M3D Gene expression COLOMBOS | ||||||||||
Note(s): | tcyP expression is activated in sulfate-containing medium and repressed in cysteine-containing medium Chonoles Imlay KR,2015 |
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Evidence: | [EXP-IDA-TRANSCRIPT-LEN-DETERMINATION] Length of transcript experimentally determined | ||||||||||
Reference(s): | [1] Chonoles Imlay KR., et al., 2015 | ||||||||||
Promoter | |||||||||||
Name: | tcyPp | ||||||||||
+1: | 1810882 | ||||||||||
Distance from start of the gene: | 52 | ||||||||||
Sequence: |
tggaataagcaattccatttgaatataagagccagctcacagttctgttaatcttgcgccAacactatgactgctacgcag |
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Evidence: |
[EXP-IDA-TRANSCRIPTION-INIT-MAPPING] [RS-EPT-CBR] |
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Reference(s): |
[1] Chonoles Imlay KR., et al., 2015 [2] Salgado H, et al., 2012 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
nd | CysB | activator | tcyPp | nd | nd | nd | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [1] |
RNA cis-regulatory element | ![]() |
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Regulation, transcriptional elongation | |
Attenuator type: | Translational |
Strand: | forward |
Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
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terminator | -6.4 | 1810887 | 1810907 | cgccaacactATGACTGCTACGCAGTGATAgaaataataa |
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |
Reference(s) |
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