RegulonDB RegulonDB 10.8: Operon Form

nimT operon and associated TUs in Escherichia coli K-12 genome

Name: nimT
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: nimT
Gene(s): nimT   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Name: nimTp
+1: 1875657
Distance from start of the gene: 16
Sequence: atttgtcattttagcttgattcaacataacaataaaaacggtaaggtacagcctcgtttgTaacaatgagaagcatatgac
Evidence: [NAS]
Reference(s): [1] Ogasawara H., et al., 2015
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal NimR repressor nimTp 1875574 1875595 -73.0 acctgtgcatCATTTTGTCCGAACTTAGCGATaatttgtcat nd [BPP], [CV(CHIP-SV/GEA/GS)], [CV(CHIP-SV/GEA/ROMA)], [CV(GEA/GS)], [CV(GEA/ROMA)], [GEA], [GS], [ICWHO] [1], [2]
proximal NimR repressor nimTp 1875623 1875637 -27.5 tgattcaacaTAACAATAAAAACGGtaaggtacag nd [BPP], [CV(CHIP-SV/GEA/GS)], [CV(CHIP-SV/GEA/ROMA)], [CV(GEA/GS)], [CV(GEA/ROMA)], [GEA], [GS], [ICWHO] [1], [2]
proximal NimR repressor nimTp 1875649 1875667 1.5 aaggtacagcCTCGTTTGTAACAATGAGAagcatatgac nd [BPP], [CV(CHIP-SV/GEA/GS)], [CV(CHIP-SV/GEA/ROMA)], [CV(GEA/GS)], [CV(GEA/ROMA)], [GEA], [GS], [ICWHO] [1], [2]