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Name: | nimT | ||||||||||
Gene(s): | nimT Genome Browser M3D Gene expression COLOMBOS | ||||||||||
Evidence: | [COMP-AINF] Inferred computationally without human oversight | ||||||||||
Promoter | |||||||||||
Name: | nimTp | ||||||||||
+1: | 1875657 | ||||||||||
Distance from start of the gene: | 16 | ||||||||||
Sequence: |
atttgtcattttagcttgattcaacataacaataaaaacggtaaggtacagcctcgtttgTaacaatgagaagcatatgac |
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Evidence: | [AS-NAS] | ||||||||||
Reference(s): | [1] Ogasawara H., et al., 2015 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
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LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
proximal | NimR | repressor | nimTp | 1875574 | 1875595 | -73.0 | acctgtgcatCATTTTGTCCGAACTTAGCGATaatttgtcat | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF], [EXP-GSELEX], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [1], [2] |
proximal | NimR | repressor | nimTp | 1875623 | 1875637 | -27.5 | tgattcaacaTAACAATAAAAACGGtaaggtacag | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF], [EXP-GSELEX], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [1], [2] |
proximal | NimR | repressor | nimTp | 1875649 | 1875667 | 1.5 | aaggtacagcCTCGTTTGTAACAATGAGAagcatatgac | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF], [EXP-GSELEX], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [1], [2] |
Reference(s) |
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