RegulonDB RegulonDB 10.9: Operon Form

cmoM-mukFEB operon and associated TUs in Escherichia coli K-12 genome

Name: cmoM-mukFEB
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: smtA-mukFEB
Gene(s): cmoM, mukF, mukE, mukB   Genome Browser M3D Gene expression COLOMBOS
Note(s): A potential RNA G-quadruplex structure, formed by guanine-rich sequences located in the coding sequence region of the gene, was identified for mukE . This structure could regulate the expression of the gene, as observed for hemL gene expression 31964733.
Evidence: [IEP] Inferred from expression pattern
[ITCR] Inferred through co-regulation
[PM] Polar mutation
Reference(s): [1] Yamanaka K., et al., 1995
[2] Yamanaka K., et al., 1996
Name: cmoMp
+1: 973404
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 133
Sequence: acatcagcggaagtggcagcaacatattgccaatcacttttttcagtgtaaaaagcatccTttctggttccttttttaacc
                           -35                   -10        +1                   
Evidence: [HIPP]
Reference(s): [3] Huerta AM., et al., 2003
[1] Yamanaka K., et al., 1995
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd H-NS activator cmoMp nd nd nd nd nd [BPP], [GEA], [IGI] nd