![]() ![]() ![]() ![]() |
Name: | cecR-ybhGFSR | |||||||||
Gene(s): | ybhR, ybhS, ybhF, ybhG, cecR Genome Browser M3D Gene expression COLOMBOS | |||||||||
Note(s): | The ybhG gene is upregulated by long-term (8 to 12 h) exposure of E. coli to some biocides Merchel Piovesan Pereira B, Wang X, Tagkopoulos I,2020. |
|||||||||
Evidence: | [ICWHO] Inferred computationally without human oversight | |||||||||
Promoter | ||||||||||
Name: | cecRp | |||||||||
+1: | 830669 | |||||||||
Sigma Factor: | Sigma70 Sigmulon | |||||||||
Distance from start of the gene: | 26 | |||||||||
Sequence: |
cgttgctaaaattcttagccatactggacaactcccctatggagtcataatcttaatcaaTcatttgattaagaatggact -35 -10 +1 |
|||||||||
Evidence: |
[HIPP] [IEP] [IHBCE] [IPI] |
|||||||||
Reference(s): | [1] Yamanaka Y., et al., 2016 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | CecR | repressor | cecRp | 830658 | 830678 | 2.5 | gagtcataatCTTAATCAATCATTTGATTAAgaatggactg | nd | [GEA], [APIORCISFBSCS], [BPP], [GS] | [1], [2] |
Reference(s) |
![]() |
---|---|