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| Operon |  |
|---|---|
| Name: | cecR-ybhGFSR |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | cecR-ybhGFSR | |||||||||
| Gene(s): | ybhR, ybhS, ybhF, ybhG, cecR Genome Browser M3D Gene expression COLOMBOS | |||||||||
| Note(s): | The ybhG gene is upregulated by long-term (8 to 12 h) exposure of E. coli to some biocides Merchel Piovesan Pereira B, Wang X, Tagkopoulos I,2020. |
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| Evidence: | [ICWHO] Inferred computationally without human oversight | |||||||||
| Promoter | ||||||||||
| Name: | cecRp | |||||||||
| +1: | 830669 | |||||||||
| Sigma Factor: | Sigma70 Sigmulon | |||||||||
| Distance from start of the gene: | 26 | |||||||||
| Sequence: |
cgttgctaaaattcttagccatactggacaactcccctatggagtcataatcttaatcaaTcatttgattaagaatggact -35 -10 +1 |
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| Evidence: |
[HIPP] [IEP] [IHBCE] [IPI] |
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| Reference(s): | [1] Yamanaka Y., et al., 2016 | |||||||||
| Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
|---|---|---|---|---|---|---|---|---|---|---|
| LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
| proximal | CecR | repressor | cecRp | 830658 | 830678 | 2.5 | gagtcataatCTTAATCAATCATTTGATTAAgaatggactg | nd | [GEA], [APIORCISFBSCS], [BPP], [GS] | [1], [2] |
| Reference(s) |
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|---|---|
[HIPP] Human inference of promoter position