RegulonDB RegulonDB 11.0: Operon Form

cecR-ybhGFSR operon and associated TUs in Escherichia coli K-12 genome

Name: cecR-ybhGFSR
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: cecR-ybhGFSR
Gene(s): ybhR, ybhS, ybhF, ybhG, cecR   Genome Browser M3D Gene expression COLOMBOS
Note(s): The ybhG gene is upregulated by long-term (8 to 12 h) exposure of E. coli to some biocides Merchel Piovesan Pereira B, Wang X, Tagkopoulos I,2020.
Evidence: [ICWHO] Inferred computationally without human oversight
Name: cecRp
+1: 830669
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 26
Sequence: cgttgctaaaattcttagccatactggacaactcccctatggagtcataatcttaatcaaTcatttgattaagaatggact
                              -35                 -10       +1                   
Evidence: [HIPP]
Reference(s): [1] Yamanaka Y., et al., 2016
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CecR repressor cecRp 830658 830678 2.5 gagtcataatCTTAATCAATCATTTGATTAAgaatggactg nd [GEA], [APIORCISFBSCS], [BPP], [GS] [1], [2]